This is the timeline I basically took from JMM's website (
http://www.myuselessknowledge.com/joe/index.php?option=com_content&task=view&id=445&Itemid=59), which to me is the most complete timeline I have ever seen:
DDP SE:D 1-6 (if you consider it canon)
DDP Joe:D 1-3 (if you consider it canon)
Marvel 1-21
Hasbro 21B (if you consider it canon)
Marvel 22-32
Hasbro 32 1/2 (if you consider it canon)
Marvel 33-36
Hasbro 36 1/2 (if you consider it canon)
Marvel 37-52
Marvel YB 2
Marvel J&TF 1-4 (if you consider it canon)
Marvel SM 1
Marvel 53
Marvel SM 2
Marvel 54-56
Marvel YB 3
Marvel 57-58
Marvel SM 3-4
Marvel 59
Marvel SM 5
Marvel 60-61
Marvel SM 6
Marvel 62-63
Marvel SM 7
Marvel 64-65
Marvel SM 8
Marvel 66-67
Marvel SM 9
Marvel 68
Marvel YB 4
Marvel SM 10
Marvel 69-71
Marvel SM 11-13
Marvel 72-74
Marvel SM 14-15
Marvel 75-80
Marvel SM 16
Marvel 81-82
Marvel SM 18-19
Marvel 83
Marvel SM 17
Marvel 84-85
Marvel SM 20-21
Marvel 86
Marvel SM 22
Marvel 87
Marvel SM 23
Marvel 88
Marvel SM 24
Marvel 89-90
Marvel SM 25
Marvel 91
Marvel SM 26
Marvel 92
Marvel SM 27-28
Marvel 93-136
Marvel 143
Marvel 137-138
Marvel 139-142 (if you consider it canon)
Transformers G2 2 (if you consider it canon)
Marvel 144-155
IDW 155 1/2-161
As for European Missions, I believe those are just Action Force reprints so they are considered an alternate universe. If you consider them canon, good luck finding a spot for them.